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叢枝菌根真菌和有機(jī)土基質(zhì)栽培對甜椒根際微生物分子多態(tài)性的影響

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叢枝菌根真菌和有機(jī)土基質(zhì)栽培對甜椒根際微生物分子多態(tài)性的影響

Effects of Arbuscular Mycorrhizal Fungus andOrganic Substrate on the Molecular Diversity ofMicrobes in Sweet Pepper Rhizosphere underProtected CultivationChaoxing HE*, Linchuang WANG, Zhibin ZHANGInstitute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 100081, ChinaSupported by the National Key Technology RTechnically Assisted by the Key Laboratory of Horticultural Genetic Improvement of theMinistry of Agriculture.*Corresponding author. E-mail: hechaoxing126.comReceived: December 12, 2011 Accepted: April 8, 2012AAgricultural Science Organic soil substrate; Denaturing gradientgel electrophoresis; Microbial diversity; Sweet pepperSoil microorganisms are the keycomponent of soil. Act as thepromoters in transformationand recycling of soil organic mattersand energy, soil microorganisms areinvolved in the decomposition of soilorganic matters, the formation of soilhumus and recycling soil nutrients.The structure and activities of soil mi-crobiota not only determine the fertilityand quality of soil, but also link to theproductivities of plants growing onthem1. Polymerase chain reaction-denaturing gradient gel electrophore-sis (PCR-DGGE) is a novel molecularmethod provides faster and more ac-curate analysis and comparison of mi-crobiota variation than the convention-al plate culture method2. DGGE tech-nique can effectively separate DNAsequences with the same molecularweight but different base sequences.Researchers have investigated thestructure of soil microbiota using PCR-DGGE, for example, some studieshave been taken to understand theenvironmental, spatial and temporalvariation of bacterial populations3.Protected vegetable cultivationand production has recently gainedrapid progress in China which stronglyguarantees the year-round vegetableprovidence. However, the protectedvegetable cultivation in China is facingsome constraints which affect the sus-tainable development of the industry,such as the low productivity, con-straints caused by the continuouscropping, imbalance in soil microbiota,soil secondary salinization, etc. Duringthe previous years, the application ofsome organic cultivation techniques inprotected vegetable production inte-grated with the straw and manure re-turning into the field. With these tech-niques, problems in protected cultiva-tion, e.g. soil crust, frequent epidemicof soil-borne diseases, continuouscropping constraints and undergroundwater pollution, are partly solved. Fur-thermore, these techniques can alsoimprove the quality of vegetables andsave the cost of production4. Othertechniques, such as inoculating veg-etable seedlings with some beneficialsymbiotic microorganism, integratedwith the organic protected cultivation,can increase the vegetable productivi-ty,improve the quality of the agro-products, and decrease the input offertilizers and chemicals. Consequent-ly, they show their significance in envi-ronmental protection and improvementof economic value5. On this basis, thisstudy was designed to elucidate theeffects of these new techniques on thediversity of soil microbiota. The currentstudy was to investigate the moleculardiversity of soil microbiota in the sweetpepper following different soil treat-ments of arbuscular mycorrhizal fun-gus inoculation (untreated soil as thecontrol). The results were used to un-derstand the variation of microbialstructure after application of organicmatters and arbuscular mycorrhizafungus.DOI:10.16175/j.cnki.1009-4229.2012.05.042AgriculturalScience however the number of clonesobtained was notably changed. Thetreatments also changed the structureof bacterial population with somespecies absent or present in compari-son with the control. In the organic soil,there appeared to be more not closelyrelated bacterial populations than thecontrol soil. It also favored the growthand reproduction of some dominantspecies. Such results might be due tothe fact that organic soil had improvedsoil quality, and high organic mattercontent and humus, which provided afavorable condition for the growth ofmicroorganisms. Treatments with fun-gal inoculation caused the increase ofbacterial species; among them weresome new species. Some specieswere disappeared in those treatmentsand the abundance of some universalbacteria was increased. Suggestedfrom the previous reports, such varia-tion might be related to the interactionsof arhusclar mycorrhiza on host plantsfor plant growth and disease resis-tance, e.g. the increase and abun-dance of some effective microorgan-isms11,13,24,25,27,28, the decrease and ab-senceofsomepathogenicbacteria15-20.Judged from the similarity analysis, itwas concluded that the soil type hadmore influence on the diversity of rhi-zosphere microbiota than G.M inocu-lation, and the control soil with G.M in-oculation had stronger effect on the di-versity variation than the organic soil.Some consistent changes in microbialpopulations occurred for both types ofsoil after G.M fungi inoculation and thesimilarity of soil microbiota of two soiltypes was increased.Comprehensively, from theDGGE analysis on the rhizospheremicrobiota diversity in soils from differ-ent treatments, the bacterial diversityand population structure was affectedby organic soil cultivation andarhusclar mycorrhiza fungi inoculationwith some bacterial species were in-creased or decreased or their abun-dance changed. Further studies werestill needed to clarify the specific bac-terial species significantly influencedand their effects on crop yield. Suchstudies would be helpful in the de-velopment and utilization of some1025AgriculturalScience&TechnologyAgricultural Science & Technology Vol.13, No.5, 20122012Responsible editor: Ze LIU Responsible proofreader: Xiaoyan WUnovel microbial agents and microbialfertilizers.References1 ZELLES L. Fatty acid patterns of phos-pholipids and lipopolysaccharides in thecharacterisation of microbial communi-ties in soil: a review J. Biology andFertility of Soils, 1999, 29: 111-129.2 TORSVIK V. Microbial diversity and fun-ctioninsoil:fromgenestoecosystemsJ.Curr Opin Microbiol, 2002, 5: 240-245.3 NAKATSU CH. Soil microbial communi-ty analysis using denaturing gradientgel electrophoresisJ. Soil Science So-ciety of America, 2007, 71: 562-571.4 HE SX (賀超興 ), ZHANG ZB (張志斌 ).New techniques in organic cultivation ofenvironmental friendly protected veg-etable production(設(shè)施蔬菜環(huán)境友好型有機(jī)栽培新技術(shù) )J. Journal of North-west Horticulture (西北園藝 ), 2007, 3:4-6.5 SHI ZY(石兆勇 ), LIU RJ(劉潤進(jìn) ), et al.Effects of culture substrates and AMfungus on horticultural crops (栽培基質(zhì)與 AM 真菌對園藝作物的影響 )J. Chi-nese Journa1 of Eco-agriculture(中國生態(tài)農(nóng)業(yè)學(xué)報(bào) ), 2002, 10(2): 50-52.6 MUYZER, ELLEN CW, ANDRE GU.Profiling of complex microbial popula-tions by denaturing gradient gel elec-trophoresis analysis of polymerasechain reaction genes coding for 16SrRNA J. Appl Environ Microbiol, 1993,59: 695-700.7 ZHOU J, BRUNS MA, TIEDJE JM. DNArecovery from soils of diverse composi-tion J. Applied and Environmental Mi-crobiology, 1996, 62: 316-322.8 SMITH SE, READ DJ. Mycorrhizal sym-biosis M. 2nded. London: AcademicPress, 1997: 1-10.9 KOIDE RG, MOSSE B. 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Inoculation of field-es-tablished mulberry and papaya witharbuscular mycorrhizal fungi and amycorrhiza helper bacterium J. Myc-orrhiza, 2002, 12(6): 313-316.14 LIU RJ (劉潤進(jìn) ), SHEN CY (沈崇堯 ).Inductive effects of VA fungus andVerticillium dahliae on cotton patho-genesis proteins(菌根對大麗輪枝菌于棉花體內(nèi) PR 蛋白的誘導(dǎo)作用 )J. ActaPhytopathologica Sinica (植物病理學(xué)報(bào) ), 1993, 23(2): 162-167.15 HU ZJ (胡正嘉 ), WANG P (王平 ). Ef-fects of VA fungus on cotton wilt dis-ease(菌根真菌對棉花枯萎病的影響 )J. Acta Pedologica Sinica(土壤學(xué)報(bào) ),1994, 31(supplement): 212-217.16 FILION M, ST-ARNAUD M, FORTINJA. Interactive effects of arbuscularmycorrhizal fungus Glomus in-traradices and different rhizospheremicroorganisms J. New Phytologist,1999, 141: 525-533.17 ZHU HH(朱紅惠 ), LONG LK(龍良坤 ),YANG SZ (羊宋貞 ), et al. Influence ofAM fungus on Ralstonia solanacearumpopulation and bacterial communitystructure in rhizosphere (AM 真菌對青枯菌和根際細(xì)菌群落結(jié)構(gòu)的影響 )J.Mycosystema(菌物學(xué)報(bào) ), 2005, 24(1):137-142.18 ABDEL-FATTAH GM, SHABANA YM.Efficacy of the arbuscular mycorrhizalfungus Glomus clarum in protection ofcowpea plants against root rotpathogen Rhizoctonia solani J. Jour-nal of Plant Disease and Protection,2002, 109: 207-215.19 ABDALLA ME, ABDEL-FATTAH GM.Influence of the endomycorrhizal fun-gus Glomus mosseae on the develop-ment of peanut pod rot disease inEgyptJ.Mycorrhiza,2000,10:29-35.20 VIGO C, NORMAN JR, HOOKER JE.Biocontrol of the pathogen Phytoph-thora parasitica by arbuscular mycor-rhizal fungi is a consequence of effectson infection loci J. Plant Pathology,2000, 49: 509-514.21 ARTURSSON V, FINLAY RD, JANS-SON JK. Combined bromodeoxyuri-dine immunocapture and terminal re-striction fragment length polymorphismanalysis highlights differences in theactive soil bacterial metagenome dueto glomus mosseae inoculation orplant speciesJ. Environmental Micro-biology, 2005, 7(12): 1952-1966.22 BHATIA NP, ADHOLEYA A, SHARMAA. Biomass production and changes insoil productivity during long term culti-vation of Prosopis juliflora (Swartz) DCinoculated with VA mycorrhiza andRhizobium spp.in a semiarid waste-landJ. Biol Fertil Soils, 1998, 26:208-214.23 BAREA JM, AZCóN R, AZCóN-AGU-LAR C. Mycorrhizosphere interactionsto improve plant fitness and soil qualityJ. Antonie Van Leeuwenhoek, 2002,81(1/4): 343-351.24 GAMALERO E, TROTTA A, MASSAN, et al. Impact of two fluorescentpseudomonad sand an arbuscular my-corrhizal fungus on tomato plantgrowth, root architecture and P acquisi-tionJ.Mycorrhiza,2004,14:185-192.25 QIN FL (秦芳玲 ), WANG JG (王敬國 ).Effects of VA fungus and Bacillusmegaterium on the growth and nitro-gen utilization in red clover (Trifoliumpratense)(菌根真菌和解磷細(xì)菌對紅三葉草生長和氮磷營養(yǎng)的影響 )J. ActaPratacultuae Sinica (草業(yè)學(xué)報(bào) ), 2000,9(1): 9-14.26 CAI XM(蔡宣梅 ), ZHANG QF(張秋芳 ),ZHENG WW (鄭 偉 文 ). Effect of VAmycorrhizal fungi and Acetobacter di-azotrophicus on the growth of supersweet corn(VA 菌根菌與重氮營養(yǎng)醋桿菌雙接種對超甜玉米生長的影響 )J.Fujian Journal of Agricultural Sciences(福建農(nóng) 業(yè) 學(xué) 報(bào) ), 2004, 19 (3): 125-159.27 LI SL (李樹林 ), ZHAO SJ (趙士杰 ),ZHENG HL (鄭 紅 麗 ). Effect of VAMfungi and plastic-cover on Verticilliumwilt of eggplant and microbial popula-tion in eggplant root zone(VA 菌根真菌和覆膜結(jié)茄子黃萎病及茄根區(qū)微生物量的影響 )J. Journal of Inner Mongo-lia Agricultural University: Natural Sci-ence Edition (內(nèi)蒙古農(nóng)業(yè)大學(xué)學(xué)報(bào) : 自然科學(xué)版 ), 1982, 26(1): 319-324.28 BAGYARAJ DJ, MENGE JA. Interac-tion between a VA mycorrhiza andazotobaeter and their effects on rhi-zosphere microflora and plant growthJ. New Phyto, 1978, 80: 567-573.29 KOTHARI SK, MARSCHNER H, RO-MHELD V. Effect of a vesicular-ar-buscular mycorrhizal fungus and rhi-zosphere andmanganese content andconcentration in red clover (Trifoliumpretense L.) plants J. New Phyto,1989, 112(2): 215-219.30 GENGGD(耿廣東 ), LI L(李莉 ), ZHANGSQ(張素勤 ). Effects of VA-mycorrhizason absorption of mineral elements ofcucumber and quantity of microorgan-isms in the root medium (VA 菌根對黃瓜礦質(zhì)元素吸收和根際土壤微生物數(shù)量的影響 )J. Jiangsu Agricultural Sci-ences(江蘇農(nóng)業(yè)科學(xué) ), 2009 (1): 284-285.1026AgriculturalScience&TechnologyVol.13, No.5, 2012 Agricultural Science & Technology2012華中神農(nóng)箭竹更新幼齡地下莖伸長規(guī)律研究王 玲,李 昆,孟銀萍,趙麗雅,李兆華*(湖北大學(xué)資源環(huán)境學(xué)院,湖北武漢 430062)摘 要 目的 探討華中神農(nóng)箭竹更新幼齡地下莖的伸長規(guī)律 。方法 在神農(nóng)架國家自然保護(hù)區(qū)內(nèi)涼風(fēng)埡設(shè)置樣地,選取六叢獨(dú)立生長的神農(nóng)箭竹作為研究樣本,測量各齡級地下莖長度與直徑,地下莖齡級采用倒逐齡法確定 。結(jié)果 通過樣地調(diào)查研究,可以發(fā)現(xiàn)在神農(nóng)箭竹的幼苗期,地下莖隨時間序列快速延長,呈指數(shù)曲線增長 。研究結(jié)果表明,克隆更新的神農(nóng)箭竹幼苗雖然無性繁殖生長了 15 年,但是此新世代的種群還未達(dá)到穩(wěn)定狀態(tài) 。結(jié)論 該研究通過對神農(nóng)箭竹地下莖伸長規(guī)律的探索,以期為掌握此物種生長周期的基本特性提供理論支持 。關(guān)鍵詞 神農(nóng)箭竹;克隆生長;地下莖;曲線擬合;神農(nóng)架基金項(xiàng)目 國家自然科學(xué)基金( 31070370) 。作者簡介 王玲( 1987-),女,湖北襄陽人,碩士研究生 , 從事植物生態(tài)學(xué)研究, E-mail: wlk_211126.com。* 通訊作者 。收稿日期 2012-02-02 修回日期 2012-03-12!Responsible editor: Qingqing YIN Responsible proofreader: Xiaoyan WUlation (實(shí)心狹葉方竹種群的生物量結(jié)構(gòu)與地下莖生長規(guī)律研究 )J. Journal ofForest Research(森林研究雜志 ), 2009,22: 662-666.8 LI ZH, DENICH M, BORSCH T. Effectsof bamboo Fargesia murielae on plantdiversity in fir forest on Mountain Shen-nongjia J. Forest Stud China, 2004, 6(4):17-22.9 LI ZH , DENG L, ZHAO BY, et al.Species and distribution of mountainbamboos in Shennongjia, Central ChinaJ. J For Res, 2003, 14(1): 35-38.10 TIAN XQ. Natural regeneration of mou-ntain bamboos on Mount QinglingJ.Journal of Bamboo Research, 1991,10(3): 23-31.11 TAYLOR AH, QIN ZS. Tree regenera-tion after bamboo die-back in ChineseAbies-Betula forests J. Journal ofVegetation Science, 1992, 3: 253-260.12 LI ZH, DENICH M. Elevational diversityof arrow bamboo (Fargesia spath-acea) communities on Mount Shen-nongjia in Central ChinaJ. J For Res,2002, 13(3):171-176.13 LI ZH, DENICH M. Post-fire regenera-tion of umbrella bamboo (Fargesiamurielae) on Mount Shennongjia inCentral China J. Ecol Env & Cons,2002, 8: 201- 205.14 LI ZH , DENG L, ZHAO BY, et al.Shoot sprouting of arrow bamboo Far-gesia spathacea along an altitudinalgradient in Central China J. B am J,2003, 20: 1-11.15 LI ZH, DENICH M, DENG L. Seedproduction and dispersal of umbrellabamboo(Fargesia murielae)after massflowering in central china J. B am J,2004, 21: 8-17.16 LIU P(劉平 ), WANG N(王寧 ), SUN QJ(孫清江 ), et al. Study on growth modeland amount maturity of high-yieldingpoplar in Xinjiang Ili(新疆伊犁地區(qū)速生楊樹生長模型及數(shù)量成熟研究 )J.Journal of Xinjiang Agricultural Univer-sity(新疆農(nóng)業(yè)大學(xué)學(xué)報(bào) ), 2003, 26: 45-48.17 LUO YT (羅應(yīng)婷 ), YANG YJ (楊鈺娟 ).SPSS statistical analysis from basisto practice(SPSS 統(tǒng)計(jì)分析 從基礎(chǔ)到實(shí)踐 )M. Beijing: Publishing Houseof Electronics Industry(北京 : 電子工業(yè)出版社 ), 2007.18 DAI GJ (戴國俊 ), WANG JY (王金玉 ),YANG JZ(楊建生 ), et al. Fitting growthcurve equation by software SPSS (應(yīng)用統(tǒng)計(jì)軟件 SPSS 擬合生長曲線方程 )J. Animal Husbandry & VeterinaryMedicine (畜牧與獸醫(yī) ), 2006, 38: 28-30.19 DE KH, VAN GJ. The ecology andevolution of clonal plants M. Leiden:Backhuys Publishers, 1997.20 ZHOU BZ (周本智 ), FU MY (傅懋毅 ).Review on bamboos undergroundrhizome-root system research (竹林地下鞭根系統(tǒng)研究進(jìn)展 )J. Forest Re-search(林業(yè)科學(xué)研究 ), 2004, 17: 533-540.21 WANG KH (汪奎宏 ), HE QJ (何奇江 ),WENG FJ(翁甫金 ), et al. Investigationand Analysis on Und

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